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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs59747617 chr3:148869660 G/A LOC93622 chr4:6675818-6677774:+ -0.29 -5.89 7.21E-9 Box Plot
THCA rs59752758 chr13:82073288 TA/T LHX1 chr17:35294084-35301912:+ 0.29 6.01 3.71E-9 Box Plot
THCA rs59753385 chr6:151764648 A/G NEK5 chr13:52607747-52703214:- 0.44 6.57 1.32E-10 Box Plot
THCA rs59758207 chr3:15100161 A/G SUGT1P1 chr9:33503653-33510709:- -0.61 -6.04 3.13E-9 Box Plot
THCA rs59763530 chr2:132209516 G/C CCDC74B chr2:130896860-130902707:- 0.37 6.5 2.03E-10 Box Plot
THCA rs59773917 chr14:66744628 C/T ATP6V1D chr14:67761088-67826982:- 0.31 6.47 2.43E-10 Box Plot
THCA rs59777067 chr11:49015350 C/T FOLH1B chr11:89372395-89431886:+ 0.45 6.41 3.51E-10 Box Plot
THCA rs597908 chr11:49257406 G/C FOLH1B chr11:89372395-89431886:+ 0.35 6.16 1.59E-9 Box Plot
THCA rs598071 chr11:77560652 G/T INTS4L1 chr7:64601603-64694600:+ 0.6 9.88 4.63E-21 Box Plot
THCA rs59814044 chr7:140130365 G/T LOC441455 chr9:99488103-99489749:+ 0.52 6.73 4.73E-11 Box Plot
THCA rs59819528 chr8:11210824 T/G SGK223 chr8:8175258-8244008:- -0.44 -8.13 3.6E-15 Box Plot
THCA rs59829052 chr5:170826377 A/G CLEC2D chr12:9817565-9852151:+ -0.18 -5.92 6.03E-9 Box Plot
THCA rs59832724 chr2:132213971 G/A CCDC74B chr2:130896860-130902707:- 0.38 6.74 4.58E-11 Box Plot
THCA rs59841971 chr14:66814324 C/T ATP6V1D chr14:67761088-67826982:- 0.43 7.5 3.07E-13 Box Plot
THCA rs598895 chr17:18291975 G/A LOC162632 chr17:16614993-16707819:+ 0.48 8.35 7.4E-16 Box Plot